tracts.driver_utils.output_simulation_data_sex_biased

output_simulation_data_sex_biased(sample_population, optimal_params, model, driver_spec, ad_model_autosomes='DC', ad_model_allosomes='DC')

Creates output graphs to compare data and the theoretical tract length distribution inferred by the model. Also saves migration matrices, tract length distributions, and optimal parameters to output files. For details on the output files and graphs produced, see online documentation.

Parameters:

• sample_population (Population) – The population for which to output simulation data.

• optimal_params (ndarray) – The optimal parameters for the model.

• model (ParametrizedDemographySexBiased) – The demographic model for which to output simulation data.

• driver_spec (InferenceConfig) – The driver specification containing output configuration.

• ad_model_autosomes (str) – The model for autosomal admixture. Defaults to ‘DC’.

• ad_model_allosomes (str) – The model for allosomal admixture. Defaults to ‘DC’.