tracts.core

Functions

_compute_objective(parameters, *, ...)	Evaluate the optimization objective (negative log-likelihood) for a given parameter vector.
optimize_cob_sex_biased_single_step(p0, ...)	Optimizes the log-likelihood over all parameters defined by the demographic model, given a specified pair of admixture models for autosomes and allosomes.
optimize_cob_sex_biased_two_steps(p0, ...[, ...])	Optimizes the log-likelihood over all parameters defined by the demographic model, for a specified admixture model applied to both autosomes and allosomes.